tag: bio-systems

empathy (smoke and mirrors)

John Hopkins → 21::February::2010 12:48 → cats::thesis

John Vallee, 54, lives near the trestle that spans the Crane Creek and was watching TV when he heard a loud screech. He went outside and first thought he saw a blanket tangled under a rail car. Then he realized it was a person.

“It’s going to be hard for me to get to sleep,” Mr. Vallee told Florida Today. “I can’t get it out of my mind.”

The energized impression and apprehension of be-ing leaves us with resonant formations in embodied memory. And it is resonance that best circumscribes (models) the phenomena of the propagation of empathy from the Other to the Self. Although there is no hard evidence in humans, the concept of mirror neurons would seem to support the idea of resonance. Caught a lecture at UM with Deb on “Empathy in Normal Adult Development and Neurological Disease” with Bob Levenson from UCB which got me thinking of the actual mechanism that allows for the transmission of the energies of expression across Cartesian space from the Self to the Other. The obvious model would be the transmission of band-limited radiative (visual, auditory, touch, etc) energy which then is apprehended by the neural system, a system which is sensitive to ‘matched’ or similar experiences that have already impinged and impressed themselves on the body system. This impression process changes the body system from one energy configuration to another. And any life system will have fundamental resonant pathways — these would be necessary determinants of basic learned experience — whatever the particular and precise mechanism is (mirror neurons being perhaps a primary model), the idea of resonance seems to be key. Resonance would depend on some accounting of sameness and difference as per prior embodied experience and the persistence of impressions (which themselves are configurations of energized neuronal structures: memory) among other factors. There would have to be a means for rapid energy pattern-matching across a huge volume of semi-fixed memory structures in the brain — it would be impossible to check all possible prior impressions with all live incoming impressions, so there would have to be some kind of disgressionary or limiting function to the process in the form of step or directional filters…

I can’t get you out of my mind…

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myopia and narrow vision

John Hopkins → 12::February::2010 17:01 → cats::now reading, thesis

What is certain is that even a skill as abstract as literacy has an unexpectedly strong physical aspect. In the history of humanity, our attention has shifted from the horizon to the length of our own arms: the printed page or the electronic monitor, or at the farthest the television screen. (p. 237)

This shifting of attention has deeply affected the eyes, with a documented rise in myopia in more literate societies. Nothing like a myopic population: with the simultaneous illusion of tele-vision being foisted on bodies everywhere!

Edward Tenner, in Our Own Devices examines a number of basic technologies and their affect on embodied cultural/social participation. Think athletic shoes, chairs, eyeglasses, typewriters/keyboards, baby nursing bottles, flip-flops, and helmets. Where did they come from, why did they develop, and ultimately, what is their affect on users.

There are so many examples of this, one need only select any particular technology and begin to meditate on its source, its uses and (mis)applications: the affects on human presence gradually become apparent. The deeper the meditation on these, and the wider the field of affect is likely to surface. Tenner’s detailed histories become a bit tedious if the reader’s curiosity wears away, as the tone of the writing doesn’t change throughout, but it is in the examination of the details that connections can be made and eventually some basic principles emerge. Tenner himself is a bit glib about the meaning of the deduced affectations, and remains neutral with a slightly optimistic outlook.

In the case of computer keyboards, though, for example, he does not go beyond the direct dialectic between inventor, device, and user. Doing this, he neglects the affectations that arise not from direct usage of a device, but the indirect affects which are present as the widest context in which the device arises in a complex techno-social system. Clearly, this is not his goal, rather it appears to be more of an entertaining and surficial cabinet-of-curiosity stroll through the obscure history of everyday objects. In my opinion he misses a potent opportunity to carry through to the deeper relations between technology, technique, fundamental social relation, and embodied be-ing.

Tenner, E., Our Own Devices: How Technology Remakes Humanity, Alfred A. Knopf, New York, 2003
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Food, Energy, and Society

John Hopkins → 30::January::2010 07:58 → cats::bibliography, thesis

For most of the time that humans have inhabited the earth, their prime source of power has been their own muscle power. …

Early additional sources of power included human slaves and domesticated animals. The hunting/gathering societies were helped when an extra food gatherer or hunter could join in the task of securing food. Likewise, the labor intensiveness of primitive agriculture increased both the need for and the usefulness of slave and animal labor. …

A slave or extra hunter, of course, would have to be fed. However, two hunters could kill more than twice as much game as a single hunter could kill alone. In this way, additional labor provided a greater return in energy than the energy input required for its maintenance. (p. 68)

Pimentel, D., Pimentel, M., 2008, Food, Energy, and Society, Third Edition, Taylor And Francis Group, Boca Raton, Florida. [Pimentel, D., Pimentel, M., 1996, Food Energy and Society (revised edition), University Press of Colorado, Boulder, Colorado, 1996]
I haven’t gotten access to the most current (2008) edition of this major collation of numbers, but the 1996 version is recent enough for the extrapolation process to be framed and the principles to be clearly demonstrated. Unfortunately that extrapolation reveals a worsening situation than they originally laid out (or imagined!) in 1979. With a detailed quantitative analysis of the (energy) costs of all eras and types of food production, as well as an examination of pesticide use, water, biodiversity, and soil resource issues, the separate chapters are full of numbers and comparisons which are remarkable in extent and sobering in their basic message. It would be possible to verify the extensive research in detail by tracking down the fifty-pages of references, but the message is simple: the human species is exerting an ever-increasing energy drain on the global environment merely to subsist, and there are definitely better and worse ways to marginally affect the situation. Humans tend to be wasteful — but any life-form causes this process of entropic waste (energy) production merely by living — it is not an avoidable condition. It appears now that the problems are of such a wide-scale, and the solutions are presently so haphazard (as applied by nation-states rather than through some trans-national instrument), that the inevitable upward geometric curves (population, resource consumption, environmental degradation, etc) will reach their limit. Those curves as they exist in the mathematical domain have no real upward limit and may approach infinity asymptotically. This would represent the system with infinite energy reserves. The earth as a sub-system of the cosmos is finite, and so are the energy resources it makes available for human use.

At some level, all of this is obvious and has been communicated from the science community to the general population in a variety of forms since the 1960’s. The problem is that the behavioral feedback structured by the wider and increasingly complex social system completely overrides almost any reasonable possibility to connect cause and effect. One could begin to try and connect the dots: the energy expended driving five kilometers to the grocery store — just in the hydrocarbon cost, not accounting for the energy cost of the vehicle, the roads, the massive food distribution system — is itself enough, converted to plant protein, to live off of for several months. This book allows one to ‘do the math,’ problem is, most people can’t do math, and wouldn’t if they could. It is the principle that matters. The connection between higher technological systems and increased per capita energy consumption for ‘basic’ living is direct. While there are a few surprises, most data reflects common sense. Although common sense (common knowledge) would likely not realize that 1 kg. (2.2 lbs) of chocolate or coffee requires 18,000 kcal of energy input for the processing — and that doesn’t include packaging, delivery, or brewing. That’s the amount of energy a well-nourished adult in a developed country consumes in four days. More elsewhere!

As for slavery, mentioned above, that is another topic to address later!

I think I may fairly make two postula. First, that food is necessary to the existence of man. Secondly, that the passion between the sexes is necessary and will remain nearly in its present state. These two laws, ever since we have had any knowledge of mankind, appear to have been fixed laws of our nature, and, as we have not hitherto seen any alteration in them, we have no right to conclude that they will ever cease to be what they now are, without an immediate act of power in that Being who first arranged the system of the universe, and for the advantage of his creatures, still executes, according to fixed laws, all its various operations.

Assuming then my postula as granted, I say, that the power of population is indefinitely greater than the power in the earth to produce subsistence for man. Population, when unchecked, increase in geometrical ratio. — Thomas Robert Malthus, from “An Essay on the Principle of Population”

According to the International Programs Center, U.S. Census Bureau, the total population of the World, projected to 02/03/10 at 16:08 UTC (EST+5) is 6,800,475,730

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tool-making and control

John Hopkins → 20::January::2010 08:37 → cats::thesis

Nadine's hand, Alsace, France, June 1988

If one constructs a tool, what is one doing, and why is one doing it? How will one do it?

How to control of flows around oneself? And what does this control mean? Where does the desire to control arise from? Is it simply about evolutionary (survival/procreative) pressures? Is there anything about control that is altruistic (or simply outside of the broadly evolutionary)?

The divide between life-forms that make tools and ones that don’t is fundamental, but it may be ignored when regarding the smooth continuum framing life as a system(?) that alters the flows of energy around it generally to its advantage (or to its need to continue — life is about life needing to continue life). The divide then appears to arise only when one considers how (from a mechanistic p.o.v.) that control is exerted.

mine, Bitburg, Germany, July 1988

This divide seems especially arbitrary when the body itself may be seen as a tool. The mechanical relations between bone structures, for example, or the magnifying ability of the lens in the eye. And, extending the definition of tool beyond the purely mechanical to, say, chemical, the body is a clearly a refinery in the exact same sense as a petroleum refinery. It conducts a wide-ranging set of thermodynamically driven reactions to access and distribute concentrated energy sources that it has introduced to its system. While there is a material dividing plane, the skin, which historically looms largely absolute in determining many classifications of relation and order, that plane may also be seen as arbitrary. The surface tissues — including the entire gut and lungs — are highly permeable surfaces which are constantly interchanging matter and energy with the environment they are in. In an optimal sense, at a particular time, this interchange process does not degrade the general order of the biotic system, but it does precipitate localized and systemic change. Also to be considered are the millions of microscopic organisms which synergize with the larger human body system — without which that system would likely not survive.

Andrea, Jersey City, New Jersey, May 1988

Are there, then, distinctions to be made based on body-as-tool and the ‘external’ tool that the body/mind system synthesizes? Or are these distinctions merely artifacts of the entire mechanistic p.o.v.?

It would seem so. If one considers, again, the relations within the body between , say, limb or organ, where a part may be seen as having a particular function which benefits or affects another part. A particular part has a function (as any tool also has) which aids in the performance of the body-system and interacts with other specific mechanisms in the body. In a living body-system these inter-relations are both necessary and sufficient if one includes the those moving between the body and the external. The body is seen as an indivisible whole, but without the constant interactions with the external environment, it would, for practical purposes, dis-integrate immediately.

The point of this short meditation is to emphasize the process which a tool, by definition, precipitates. That process is the fundamental alteration of the energy flows to which the tool is applied. This process unites the purpose of both internal and external systems for energy flow change which may be seen as a tool. The body is a technology as much as anything external to it which causes an alteration of extant energy flows. (Uff, this suggests that life itself be defined as a technology as it always alters the flows around it — we are life, we alter the flows around us, we are technology.)

The division between tool-makers and those organisms which do not make tools may then be seen as a somewhat arbitrary one. Both organisms are needful of altering the surrounding flows to survive, they actualize that need via evolved mechanisms as they relate with those particular flows. The ultimate point for both internal and external tool use is the optimized continuance of life.

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The Science of Disorder

John Hopkins → 15::January::2010 09:38 → cats::bibliography, thesis

I’ll retroactively begin to add bibliographic resource links with short reviews or notes on books that come to my attention. This one arrived via the usual intentional browsing. It represents several that begin to connect the dots between thermodynamics, techno-social systems, and the affect of human presence on the planet. It suggests that the movement away from a scientific approach to a technological approach is critical to the loss of our way to understanding the messy phenomena of human intervention in our world. Technological subjects are often taught without any grounding in philosophic principles of any sort. My own education at the School of Mines required only four three-credit-hour courses of (very general and poorly taught!) humanities for the entire undergraduate degree in geophysical engineering. And those courses in no way influenced the approach or the execution of any of the hard-core engineering courses. Instead they were frequently the object of derision as juxtaposed to the tough and demanding engineering classes — an implicit gendered polarity — ‘wussy’ classes versus the rough and tough get-your-hands-dirty and only-the-toughest-survive macho applied-engineering classes. Things have changed somewhat in many engineering curricula (as evidenced by the fact that I do rather often have engineering students in my seminars and workshops), but there is the overt assumption that technology is above the messy fray of soft human affairs to which it brings only ordered progress, material wealth, and sustainable harmony. The former two are evidenced when examining closed (and limited) systems, the latter, nothing could be further from the truth.

Well-researched with both scientific and popular/media references, The Science of Disorder is readable, explicit, and provocative. (I’ll be expanding these reviews as I can manage: there is a huge backlog of rolling all previous bibliographic references to this style.)

Hokikian, J. 2002, The Science of Disorder: Understanding the Complexity, Uncertainty, and Pollution in Our World, Los Feliz Publishing, Los Angeles.
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difference, edges

John Hopkins → 06::January::2010 09:16 → cats::thesis

Meanwhile, thinking about difference and edges. Organisms are distinguished by defined/refined difference between themselves and that-which-surrounds through changes in the characteristics of the field/flux. There is also an internal(ized) sensitivity to difference that arises in an organism — as an evolutionary trait related to the search for usable energy gradients as a source for ensuing negentropic action or use. Distinguishing difference: how does it arise and proceed? Or is the energy gradient, a fundamental expression of difference, difference itself? Skin seems to be absolute and abrupt but in fact is a layered, gradational transition from Self to what is out there. And, in fact, if there is a continuous energized substrate within/below/of all, there is only difference in relatively and locally definable by characteristics which are circumscribable with non-absolute frames of reference … sheesh

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Redirecting the Flows of Energy in Natural Systems

John Hopkins → 09::December::2009 12:26 → cats::thesis

(but wait a minute, LIFE is, by definition, a redirecting of the flows of energy in a natural system — a redirecting that is a necessary (but not sufficient) condition of living systems — according to basic non-equilibrium thermodynamics of living systems.)

However, there is a scalar difference between humans and other living entities where some humans attempt this kind of control on wide scales, with others re-directing those same energies to completely different configurations, some only images of what their ‘original’ pattern of flow once were. (it’s a question of degree?)

The juxtaposition: humans re-organizing the ‘natural’ flows around them (as technology), and humans re-organizing the flows which are human — other humans (as society).

These processes are indistinguishable in their application and only express some difference in the materialized extremity of their results. Humans are simply an other expression of the natural system. It is only in the degree or scale of re-organization of flows that they extend that distinguishes them from other expressions of life. One could argue that earlier Archean life on the planet, utilizing the energy available in certain chemical bonds over eons, completely transformed the composition of the atmosphere in a process of dynamic equilibrium — something we humans are apparently doing yet again in a vastly shorter time. Life, via evolutionary developments, integrally tapped into an available energy source/flow with gusto until the source was depleted or another ‘easier’ source was encountered. Life based on photosynthetic processes of energy utilization is a example that has a long and continuing evolutionary history.

Hannah Arendt, in The Human Condition, explores this process of (the human) redirection of flows as the idea of “fabrication” — as a god-like means to artificially re-create and temporarily reify natural systems. She squarely positions this energy exertion as part of the “external subjectivization of the modern world.” This condition of externalization is a necessary precedent condition for the social and represents the ‘mechanism’ which draws granular and embodied human power from the individual into the social system (for cumulative and disgressionary use by that system). This energy consequently becomes unavailable to the individual, although the pathways that the social system constructs for the expression of its energy may be utilized by the individual, depending on their particular positioning within the system.

(Working at a job for “The Man,” that vaguely persistent image that arose in the times of African-American slavery, frames this dynamic. While most individuals in the middle- and upper-class would consider that their work in the service of someone else is merely a fact of existence and that the convertible and abstracted instrumental returns (money) more than suffice as a reward for the life-time and life-energy expended in this way. It is this collective faith in the abstracted social instrument of money (and other codes) (see Code and Money), expressed as a crucial social adhesive, which gives the social system a form for the expression of the cumulative energy of individual participants.)

Within the life process itself, of which laboring remains an integral part and which it never transcends, it is idle to ask questions that presuppose the category of means and end, such as whether men live and consume in order to have the strength to labor or whether they labor in order to have the means of consumption.

If we consider this loss of the faculty to distinguish clearly between means and end in terms of human behavior, we can say that the free disposition and use of tools for a specific end product is replaced by rhythmic unification of the laboring body with its implement, the movement of laboring itself acting as the unifying force. Labor but not work requires for best result a rhythmically ordered performance and, in so far as many laborers gang together, needs rhythmic co-ordination of all individual movements. In this motion, the tools lose their instrumental character, and the clear distinction between man and his implements, as well as his ends, becomes blurred. What dominates the labor process and all work processes which are performed in the mode of laboring is neither man’s purposeful effort nor the product he may desire, but the motion of the process itself and the rhythm it imposes upon the laborers. Labor implements are drawn into this rhythm until the body and tool swing in the same repetitive movement, that is, until, in the use of machines, which of all implements are best suited to the performance of the animal laborans, it is not longer the body’s movement that determines the implement’s movement but the machine’s movement which enforces the movements of the body. — Hannah Arendt, “The Human Condition”

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roadkill

John Hopkins → 07::December::2009 08:52 → cats::thesis

death strewn on the highway. roadkill. carnivore, herbivore, amphibian, insect: getting to the other side of the road is just part of the inexorable (natural) systemic flow. Roadkill represents one intersection of human-defined flows and naturally-existing flows. The result of this fundamental intersection is near-death or absolute annihilation, a rapid reduction to component complex molecules. from the thathunk of meatier species to the simple fluttering splat of the butterfly. Leathery carcasses that persist for days despite the brutal pounding of truck tires and hard-to-remove stains on the windshield that resist even the most vigorous squeegee scrubbing whilst filling-up the tank.

Insects with a low weight-to-surface-area ratio can sometimes avoid liquidation by the slipstream effect which will carry them up and over the vehicle. But trajectory is all, and the meatier bugs, the swarming locusts and grasshoppers, have too much mass in their sagging torsos to experience this sanctified reprieve and thus become one with their maker in a soul-wrenching milli-second that can be a marvel of colorful abstraction a-la Pollack.

Along one stretch of the UFO Highway in Nevada, red locusts were on the march northward along a specific pathway that they were intent on following without regard to individual survival. At 60 MPH, the dynamic was such that their flight reaction to the approaching truck got them only a couple feet off the ground, not over the height of the hood, so, the lower grill was a mass of dessicated carcasses by the time we got to the Grand Army of the Republic Highway, a hundred miles away. Many more were simply crushed by the wheels, leaving greasy red-greenish stains on the road and in the wheel-wells: their natural trajectory on the ground was clearly discernible where it intersected with roads. I noticed in the gas station parking lot in Ely there was a small flock of birds who were picking over the the resulting detritus on the ground, and when they could manage, actually hanging onto the grills and directly harvesting the carnage, ‘burp!’ What would the evolutionary outcomes be? Birds that can smell idling cars? Locusts who tunnel for 40 feet underground when they encounter traces of heavy hydrocarbons, with luck, getting to the other side.

Larger animals, the mammals are the worst, though, when encountered at any speed. Moose and elk torsos will behave something like the old paper-straw-through-the-raw-potato trick — inertial physics at its most fundamental. The front bumper of the car will take out the long spindly legs whilst the massive quarter-ton of body-meat, at just the right height to clear the hood, will simply stay where it is. But where it is relative to the speeding windshield means that it will simply obliterate anything in the front seats of the vehicle. At low speeds, this can mean a struggling, injured animal in the laps of struggling, injured humans, gah.

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A start to meditations on The Road

John Hopkins → 06::December::2009 12:40 → cats::thesis

The road-as-pathway is a channel for the flow of energy. It is defined by socially-constructed standards and protocols: a web of socially-applied energies follow the limitations and directedness of those protocols. Roads are a human construct in response to the existence of natural blockages that divert from desired trajectories, that expend communal life-energies and threaten the control of energy resources.

The road is perhaps a synthesized mirror for the human-navigable river, that directed natural space of flow, or the ocean which is the cumulative and spatial confluence-of-all-rivers.

Practically all natural landscapes have some form of blockage as to cause a deviation to even slow and deliberate human passage. So, when there is a lack of free and easy passage, first a foot-path evolves, or is established through troddden effort. This is a trajectory for the body, with the foot leading. Seeking a pathway on foot requires vigilance and concentrated attention in many environments, though this condition is necessarily eliminated from daily life in the developed world — almost completely through the efforts to flatten, level, grade, and pave large swaths of the Terran surface.

When working in Colombia, in the eastern Llanos, for Big Oil, we hired trocha crews who would cut paths in the jungle for the geophone lines to be laid along. Armed with machetes they would hack a one-meter-wide swath along the surveyed lines, leaving short protruding sticks of vegetation cut at an angle — treacherous when struggling along the lines up steep slopes and down. One slip and you would be impaled, and in that country, any break in the protective skin could mean serious infection problems. Walking was never so high-risk: never fall down. It was a choice of absolutely impenetrable jungle on either side, or the possibility of forward/backward movement along these lines. Helipads for extraction were cut in the jungle every 5 clicks or so.

At any rate, the foot is connected to a membered body, so the whole embodied system is implicated in the formation of the pathway. With senses correlating from memorized resonance previous ways taken and the outcomes, choices are made what immediate and final trajectory the body takes. This trajectory is anchored with the planting of the foot and the establishment of balance on that foot. The four corners of the foot root momentarily with the earth. One foot following the other, and that embodied motion precisely driven by the flow of energy entering the senses. Breaking trail can be exhausting, making a way for someone else’s body to pass across the terrain. Following someone else’s path is easier.

Animals make pathways: I am following the cloven tracks of a deer, several of them. I can lope along the game trail at a fair clip, despite the altitude which stretches lungs to a pant, judging how fresh the tracks are by how they desiccate along the edges in the dry western air. But how many hours since passage does half-a-centimeter of crumbled track mean? What happens if I catch up with the deer, if they have stopped to rest or eat? What happens if there’s a mountain lion, an ambush predator, hanging around along this pathway, waiting for an easy mark? I don’t think about it, but keep running as fast as the uneven terrain allows, watching carefully for ankle-twisting roots and rocks. Hooves on a game trail tend to break up the damp soil into loose chunks which make high boots an ankle-saving necessity, though they slow me down, and don’t allow the foot to feel the ground as accurately. I run until I have to stop, sucking the air in with fast but controlled gasps. There they are, 200 yards ahead, traversing a steep slope of piƱon, upwind. Okay, today, with a bow, I would have survived a few more days with protein-stuffed belly. The path defined as an enriched flow of food energy.

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MEP and other things

John Hopkins → 29::October::2009 20:53 → cats::thesis

Presuming the Terran system is a (fully) self-regulating system, then the hypothesis would have to include the entire evolutionary process which produced human beings among other biota under the particular macroscopic and microscopic availing conditions. Self-regulation would then suggest that the system will solve the current problems of human over-population and resource spoilage as it solves all other oscillations of what is a system in thermodynamic disequilibrium. Biospheric self-organization (among a holistic range of other mechanisms that we likely have no clue about in the moment), will do it’s thing. Despite, in spite of, and at the effect of what a specific biotic evolutionary line is doing. There is plenty of data showing wide-scale fluctuations in, for example, atmospheric components related to changing biotic fluxes.

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